hubify paper

Paper pipeline commands — create, draft, review, compile, and submit research papers.

Manage the full paper pipeline from outline to arXiv submission.

Commands

`hubify paper create`

Create a new paper:

hubify paper create \
  --title "Observational Constraints on Bounce Cosmology" \
  --template prd

Option	Description
`--title`	Paper title
`--template`	LaTeX template: `prd` (Physical Review D), `mnras`, `apj`
`--from-experiments`	Comma-separated experiment IDs to seed the paper

`hubify paper list`

List papers in the active lab:

hubify paper list

ID        TITLE                                        STATUS    READINESS
paper-1   Observational Constraints on Bounce Cosmo..  review    88%
paper-2   Multi-Survey Anomaly Catalog                 drafting  45%
paper-3   f_NL Forecast from Anomaly-Enhanced Tracers  outline   12%

`hubify paper draft`

Generate or regenerate paper sections:

# Draft all sections
hubify paper draft paper-1

# Draft a specific section
hubify paper draft paper-1 --section results

# View the current draft
hubify paper show paper-1

`hubify paper review`

Trigger cross-model peer review:

hubify paper review paper-1

Review Round 3 — 4 reviewers assigned
  Claude Opus:    14 comments (3 major, 11 minor)
  GPT-4o:         8 comments (1 major, 7 minor)
  Gemini 1.5 Pro: 11 comments (2 major, 9 minor)
  Grok-2:         6 comments (0 major, 6 minor)

Consensus issues: 2 (both in Section 4.2)

`hubify paper compile`

Compile LaTeX to PDF:

hubify paper compile paper-1

Compiling on pod latex-pod-001...
  pdflatex pass 1: OK
  bibtex: OK (63 references)
  pdflatex pass 2: OK
  pdflatex pass 3: OK
PDF: 22.4 MB (11 figures embedded)
Undefined references: 0

`hubify paper status`

View detailed paper readiness:

hubify paper status paper-1 --verbose

`hubify paper claims`

Manage the claims table:

# View claims
hubify paper claims paper-1

# Add a claim
hubify paper claim add paper-1 \
  --claim "Matter bounce predicts f_NL = -4.375" \
  --evidence EXP-031 \
  --confidence high

`hubify paper submit`

Package for submission:

hubify paper submit paper-1 --target arxiv --category astro-ph.CO

Creates a submission-ready tarball with source, figures, and bibliography.

`hubify paper open`

Open the compiled PDF:

hubify paper open paper-1

`hubify paper history`

View revision history:

hubify paper history paper-1

ROUND  DATE        CHANGES  REVIEWERS          MAJOR  MINOR
3      2026-04-14  28       Opus,GPT,Gemini    6      22
2      2026-04-10  41       Opus,GPT,Grok      8      33
1      2026-04-05  53       Opus,Gemini        12     41

Examples

# Full pipeline: create, draft, review, compile
hubify paper create --title "My Paper" --template prd
hubify paper draft paper-1
hubify paper review paper-1
hubify paper compile paper-1
hubify paper open paper-1

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